Bioassay LOD Fitter
A web application for analysing concentration-response data, performing advanced sigmoidal curve fitting, and rigorously calculating the Limit of Detection (LOD).
Bioassay LOD Fitter (v0.8.0) is a web application built to analyse concentration-response data, perform advanced sigmoidal curve fitting, and calculate the Limit of Detection (LOD) for biological and chemical assays using validated statistical frameworks (Currie 1968, Holstein et al. 2015).
- Live Demo: akshamsabadi.github.io/bioassay-LOD-fitter
- Source Code: akshamsabadi/bioassay-LOD-fitter
Key Features
- Multi-Curve Plot Overlay & Leaderboard: Overlay multiple curves (e.g. Wild-Type vs Mutants, Buffer A vs B) on a shared broken logarithmic axis with color-coordinated trendlines, interactive hover-focus, and a sortable Multi-Curve Sensitivity Leaderboard displaying fold-change shifts.
- Direct Spreadsheet Clipboard Paste: Copy rows and columns directly from Microsoft Excel or Google Sheets (
Ctrl+V/Cmd+V) into the sidebar for instant table parsing. - Serial Dilution Auto-Generator: Quick-configure standard dilution series with automated concentration calculation (start concentration, dilution factor, and replicate count).
- Interactive Chart Layer Toggles: Custom toggle pills for 95% CI, LC/LD lines, LOD Zone, and Grid to inspect raw curves without visual clutter.
- Unified Single-View Analytics: View the prominent LOD Hero Card, fitted parameter micro-grid, interactive AICc comparison table, and collapsible statistical noise limits ($L_C, L_D$, blank SD, pooled SD) in a cohesive single view without tab-hopping.
- Completely client-side processing: Fast, secure local calculations without uploading sensitive biological or chemical data to external servers.
- Interactive Multi-Model Comparison: Renders a live statistical table showing R² and AICc metrics side-by-side for Linear, Langmuir, 4PL, and 5PL models, with dynamic best-fit gold-star selectors and one-click
Auto (AICc)optimization. - Assay Quality Checks Widget: Automated diagnostic checks that flag high replicate variance (CV%), poor fits, or non-monotonic trends.
- Continuous Hover Telemetry Tooltips: Smooth fade-in tooltips showing predicted values, 95% Confidence Interval bounds, and raw replicates at any coordinate, accompanied by dashed crosshair cursor guides.
- Bidirectional Table-to-Chart Highlights: Hovering over individual data points highlights the exact replicate in the calibration data table, while row hover illuminates corresponding replicate circles on the chart.
- Publication-Ready Export: Download high-resolution 300 DPI PNG plots, lossless vector SVG, and comprehensive CSV / Markdown statistical reports.